PHATRDRAFT_1719 small gtp-binding protein domain (GTP_HflX)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1719 chr_28 small gtp-binding protein domain (GTP_HflX) 100368 101612 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0383

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0037
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HflX HflX GTPase family; HflX subfamily. A distinct conserved domain with a glycine-rich segment N-... cl17170 301.3 7.18E-101 153 - 361 specific 206666
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 301.3 7.18E-101 153 - 361 superfamily 266525
GTP-bdg_N superfamily GTP-binding GTPase N-terminal; This is the N-terminal region of GTP-binding HflX-like proteins. The... - 70.976 2.68E-15 1 - 106 superfamily 205348
GTP_HflX GTP-binding protein HflX; This protein family is one of a number of homologous small, well-... - 471.569 1.81E-165 4 - 361 multi-dom 234125

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42307 Not available 227128 305146 470200 Cre16.g665650.t1.1 AT5G57960.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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