PHATRDRAFT_17199 solute carrier family 24 (sodium potassium calcium exchanger)member 2 (TIGR00367)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17199 chr_1 solute carrier family 24 (sodium potassium calcium exchanger)member 2 (TIGR00367) 183185 185389 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0249

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0185
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 71.8101 2.11E-15 374 - 434 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 71.8101 2.11E-15 374 - 434 superfamily 238008
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 95.7467 3.99E-23 125 - 261 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 95.7467 3.99E-23 125 - 261 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 95.7467 3.99E-23 125 - 261 superfamily 250805
Na_Ca_ex superfamily Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane... - 95.7467 3.99E-23 125 - 261 superfamily 250805
TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and... - 148.626 4.07E-40 115 - 621 multi-dom 232943
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 62.016 5.21E-12 380 - 435 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd1662 Not available 214918 196275 205210 Not available Not available 496439

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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