PHATRDRAFT_17414 40s ribosomal protein s8 (PTZ00148)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17414	chr_1	40s ribosomal protein s8 (PTZ00148)	833164	833781	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0146

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0228	0.14	760 130000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_S8e_like		Eukaryotic/archaeal ribosomal protein S8e and similar proteins; This family contains the eukaryotic...	cl00880	167.311	1.78E-52	5 - 190	specific	211392
Ribosomal_S8e_like superfamily		Eukaryotic/archaeal ribosomal protein S8e and similar proteins; This family contains the eukaryotic...	-	167.311	1.78E-52	5 - 190	superfamily	260676
PTZ00148		40S ribosomal protein S8; Provisional	-	312.311	1.89E-108	1 - 205	multi-dom	240292

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
29825		Not available	212907	248028	415402	Cre06.g272800.t1.2	AT5G59240.1	285611

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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