PHATRDRAFT_18239 chromatin-specific transcription elongation factor fact 140 kda subunit (COG5406)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18239 chr_2 chromatin-specific transcription elongation factor fact 140 kda subunit (COG5406) 877918 881537 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194
Normalized Mean Residue
Phatr_bicluster_0131
0.25
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 219.525 7.49E-65 197 - 446 superfamily 260321
SPT16 superfamily FACT complex subunit (SPT16/CDC68); Proteins in this family are subunits the FACT complex. The FACT... - 171.271 7.86E-49 555 - 709 superfamily 254945
SPT16 superfamily FACT complex subunit (SPT16/CDC68); Proteins in this family are subunits the FACT complex. The FACT... - 171.271 7.86E-49 555 - 709 superfamily 254945
FACT-Spt16_Nlob superfamily FACT complex subunit SPT16 N-terminal lobe domain; The FACT or facilitator of chromatin... - 129.248 6.07E-34 4 - 185 superfamily 258963
Rtt106 Histone chaperone Rttp106-like; This family includes Rttp106, a histone chaperone involved in... cl17171 91.4421 1.45E-21 837 - 918 specific 254846
PH-like superfamily Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and... - 91.4421 1.45E-21 837 - 918 superfamily 266526
COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and... - 544.607 4.88E-176 1 - 958 multi-dom 227693
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
28217 Not available 186967 216453 Not available Cre12.g540076.t1.1 AT4G10710.1 542963
KEGG description KEGG Pathway
Not available Not available
Not available -
Log in to post comments