PHATRDRAFT_19901 cg8363-isoform a (nt_trans superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_19901 chr_7 cg8363-isoform a (nt_trans superfamily) 175076 177778 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0182

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0089
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5... cl17190 230.828 1.48E-70 1 - 149 specific 238985
NK superfamily Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of... - 230.828 1.48E-70 1 - 149 superfamily 266541
pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules... cl00217 160.72 2.66E-45 690 - 866 specific 238239
pyrophosphatase superfamily Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules... - 160.72 2.66E-45 690 - 866 superfamily 260270
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 324.971 1.74E-102 210 - 628 superfamily 260139
sopT ATP sulphurylase; This enzyme forms adenosine 5'-phosphosulfate (APS) from ATP and free... - 295.074 8.28E-91 185 - 627 multi-dom 232928
DTMP_kinase thymidylate kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage... - 37.7277 0.00618888 3 - 161 multi-dom 161676

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269714 Not available 178126 63002 452787 Cre16.g677500.t1.2 AT4G14680.1 354656

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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