PHATRDRAFT_21660 (PIKKc_TOR)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21660 chr_13 (PIKKc_TOR) 715648 724619 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0040

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0035
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger... cl00119 521.706 2.94E-169 2019 - 2299 specific 119429
PI3Kc_like superfamily Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain... - 521.706 2.94E-169 2019 - 2299 superfamily 260202
DUF3385 superfamily Domain of unknown function (DUF3385); This domain is functionally uncharacterized. This domain is... - 162.048 1.14E-44 764 - 926 superfamily 256685
DUF3385 superfamily Domain of unknown function (DUF3385); This domain is functionally uncharacterized. This domain is... - 162.048 1.14E-44 764 - 926 superfamily 256685
Rapamycin_bind superfamily Rapamycin binding domain; This domain forms an alpha helical structure and binds to rapamycin. - 98.059 2.85E-23 1863 - 1978 superfamily 255029
FATC superfamily FATC domain; The FATC domain is named after FRAP, ATM, TRRAP C-terminal. The solution structure of... - 66.3345 6.37E-13 2368 - 2400 superfamily 251190
FATC superfamily FATC domain; The FATC domain is named after FRAP, ATM, TRRAP C-terminal. The solution structure of... - 66.3345 6.37E-13 2368 - 2400 superfamily 251190
FAT FAT domain; The FAT domain is named after FRAP, ATM and TRRAP. - 191.044 1.80E-52 1406 - 1756 multi-dom 251189

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
29771 Not available 206244 318014 312679 Cre09.g400553.t1.1 AT1G50030.1 284697

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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