PHATRDRAFT_22803 atp-binding protein of abc transporter (ABCD_peroxisomal_ALDP)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22803	chr_19	atp-binding protein of abc transporter (ABCD_peroxisomal_ALDP)	484210	486114	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0148

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0022	0.39	57000 97000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABCD_peroxisomal_ALDP		ATP-binding cassette domain of peroxisomal transporter, subfamily D; Peroxisomal ATP-binding...	cl17201	212.014	7.20E-65	346 - 586	specific	213190
ABC_ATPase superfamily		ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of...	-	212.014	7.20E-65	346 - 586	superfamily	266551
ABC_membrane_2 superfamily		ABC transporter transmembrane region 2; This domain covers the transmembrane of a small family of...	-	175.881	3.82E-50	29 - 265	superfamily	260492
DppF		ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and...	-	97.3354	1.08E-22	344 - 599	multi-dom	224049

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263349		Not available	206451	195344	66117	Cre10.g439000.t1.1	AT1G54350.1	561133

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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