PHATRDRAFT_23629 p-typehadsubfamily ic (MgtA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23629 chr_25 p-typehadsubfamily ic (MgtA) 358902 366662 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0218

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0130
 0.35

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 45.0535 1.09E-05 582 - 696 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 45.0535 1.09E-05 582 - 696 superfamily 119389
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 205.11 3.78E-60 114 - 354 superfamily 249606
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 205.11 3.78E-60 114 - 354 superfamily 249606
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 121.184 4.67E-31 762 - 936 superfamily 250058
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 121.184 4.67E-31 762 - 936 superfamily 250058
Cation_ATPase_N Cation transporter/ATPase, N-terminus; This entry represents the conserved N-terminal region found... cl02930 95.3422 3.41E-23 19 - 95 specific 214842
Cation_ATPase_N superfamily Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 95.3422 3.41E-23 19 - 95 superfamily 261517
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 95.7584 4.35E-23 428 - 522 superfamily 257602
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 95.7584 4.35E-23 428 - 522 superfamily 257602

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262679 Not available 215640 234748 Not available Cre09.g410050.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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