PHATRDRAFT_24195 (CPSaseII_lrg)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24195 chr_31 (CPSaseII_lrg) 97309 101876 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0215
Normalized Mean Residue
Phatr_bicluster_0127
0.23
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This group... cl00020 291.322 2.01E-90 170 - 350 specific 153215
GAT_1 superfamily Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1... - 291.322 2.01E-90 170 - 350 superfamily 260141
CPSase_L_D2 Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthase catalyses... cl17255 303.069 3.26E-94 500 - 704 specific 190425
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 107.388 1.17E-25 1041 - 1240 superfamily 266590
CPSase_sm_chain Carbamoyl-phosphate synthase small chain, CPSase domain; The carbamoyl-phosphate synthase domain is... cl03056 206.456 5.19E-61 2 - 128 specific 198165
CPSase_sm_chain superfamily Carbamoyl-phosphate synthase small chain, CPSase domain; The carbamoyl-phosphate synthase domain is... - 206.456 5.19E-61 2 - 128 superfamily 261567
CPSase_L_D3 Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase... cl19748 171.478 6.98E-49 789 - 915 specific 198164
CPSase_L_D3 superfamily Carbamoyl-phosphate synthetase large chain, oligomerization domain; Carbamoyl-phosphate synthase... - 171.478 6.98E-49 789 - 915 superfamily 268101
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 107.388 1.17E-25 1041 - 1240 superfamily 266590
MGS-like superfamily MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which... - 101.993 1.04E-24 1313 - 1425 superfamily 260295
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40323 Not available Not available 234185 422007 Cre08.g358580.t1.1 AT1G29900.1 496117
KEGG description KEGG Pathway
Not available Not available
Not available -
Log in to post comments