PHATRDRAFT_24838 topoisomerase spo11 (PRK04342)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24838 chr_1 topoisomerase spo11 (PRK04342) 1700041 1701477 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0131

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0199
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TOPRIM_TopoIIB_SPO TOPRIM_TopoIIB_SPO: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the... cl00718 225.212 1.15E-71 253 - 414 specific 173774
TOPRIM superfamily Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA,... - 225.212 1.15E-71 253 - 414 superfamily 260587
TP6A_N superfamily Type IIB DNA topoisomerase; Type II DNA topoisomerases are ubiquitous enzymes that catalyse the ATP... - 82.9535 8.09E-20 139 - 206 superfamily 190973
TP6A_N superfamily Type IIB DNA topoisomerase; Type II DNA topoisomerases are ubiquitous enzymes that catalyse the ATP... - 82.9535 8.09E-20 139 - 206 superfamily 190973
PRK04342 DNA topoisomerase VI subunit A; Provisional - 330.707 9.06E-110 83 - 430 multi-dom 235287

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42646 Not available 239125 251788 66465 Cre02.g084800.t1.2 AT5G02820.1 506531

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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