PHATRDRAFT_25417 gdp-mannose dehydratase (PLN02653)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_25417	chr_2	gdp-mannose dehydratase (PLN02653)	1050564	1051733	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0106

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0042	0.42	4.5 570

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GDP_MD_SDR_e		GDP-mannose 4,6 dehydratase, extended (e) SDRs; GDP-mannose 4,6 dehydratase, a homodimeric SDR,...	cl09931	532.944	0	8 - 348	specific	187570
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	532.944	0	8 - 348	superfamily	263925
PLN02653		GDP-mannose 4,6-dehydratase	-	622.179	0	1 - 359	multi-dom	178259

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40586		Not available	206067	263429	434640	Not available	AT5G66280.1	486654

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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