PHATRDRAFT_29456 glyceraldehyde-3-phosphate dehydrogenase (PTZ00023)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_29456 chr_16 glyceraldehyde-3-phosphate dehydrogenase (PTZ00023) 730221 731362 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0327

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0018
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Gp_dh_C Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; GAPDH is a tetrameric NAD-binding... cl19935 268.653 6.75E-90 155 - 314 specific 251539
Gp_dh_C superfamily Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; GAPDH is a tetrameric NAD-binding... - 268.653 6.75E-90 155 - 314 superfamily 268288
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; GAPDH is a tetrameric NAD-binding... cl17742 228.545 2.03E-74 3 - 150 specific 249536
Gp_dh_N superfamily Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; GAPDH is a tetrameric NAD-binding... - 228.545 2.03E-74 3 - 150 superfamily 266804
PTZ00023 glyceraldehyde-3-phosphate dehydrogenase; Provisional - 507.45 0 1 - 334 multi-dom 173322

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
28334 Not available 269867 187507 Not available Not available Not available 285579

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments