PHATRDRAFT_32940 replication protein32kda (RPA2_DBD_D)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_32940	chr_2	replication protein32kda (RPA2_DBD_D)	1149167	1149979	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0132

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0147	0.26	220 7400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RPA2_DBD_D		RPA2_DBD_D: A subfamily of OB folds corresponding to the OB fold of the central ssDNA-binding...	cl09930	103.448	8.53E-28	76 - 171	specific	239924
RPA_2b-aaRSs_OBF_like superfamily		Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with...	-	103.448	8.53E-28	76 - 171	superfamily	263924
RPA_C superfamily		Replication protein A C terminal; This domain corresponds to the C terminal of the single stranded...	-	40.0073	7.32E-05	180 - 264	superfamily	255034

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262513		Not available	209072	252815	Not available	Cre02.g100000.t1.2	AT3G02920.1	535287

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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