PHATRDRAFT_34775 ornithine cyclodeaminase (PRK08618)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_34775	chr_6	ornithine cyclodeaminase (PRK08618)	342697	343737	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0038

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0249	0.32	29000 800000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Shikimate_DH superfamily		Shikimate / quinate 5-dehydrogenase; This family contains both shikimate and quinate dehydrogenases...	-	163.302	6.33E-47	2 - 345	superfamily	267477
PRK08618		ornithine cyclodeaminase; Validated	-	195.665	2.83E-59	1 - 345	multi-dom	236313

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268461		Not available	Not available	Not available	Not available	Not available	AT5G52810.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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