PHATRDRAFT_36142 protein required for amino acid permease transport from the golgi to the cell surface (WD40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_36142 chr_9 protein required for amino acid permease transport from the golgi to the cell surface (WD40) 659200 660204 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0121

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0199
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 159.038 5.39E-46 24 - 319 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 159.038 5.39E-46 24 - 319 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 116.341 1.55E-29 2 - 296 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4260 Not available 185924 318797 68302 Cre17.g713900.t1.2 AT3G18140.1 289141

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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