PHATRDRAFT_36720 vacuolar protein sorting 45 homolog (Sec1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_36720	chr_11	vacuolar protein sorting 45 homolog (Sec1)	217495	219162	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0167

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sec1		Sec1 family; Sec1 family.	cl15415	408.944	8.16E-136	1 - 550	specific	250279
Sec1 superfamily		Sec1 family; Sec1 family.	-	408.944	8.16E-136	1 - 550	superfamily	265693

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
750		Not available	214026	208516	69761	Cre07.g333950.t1.2	AT1G77140.1	338211

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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