PHATRDRAFT_37959 thf1_synp6protein thf1 (ThylakoidFormat superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_37959	chr_14	thf1_synp6protein thf1 (ThylakoidFormat superfamily)	513514	514680	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0488

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0046	0.37	0.0024 2700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ThylakoidFormat superfamily		Thylakoid formation protein; THF1 is localized to the outer plastid membrane and the stroma. THF1...	-	100.783	2.45E-25	83 - 278	superfamily	264568
PS_II_psb29		photosystem II biogenesis protein Psp29; Psp29, originally designated sll1414 in Synechocystis 6803...	-	90.4857	9.41E-22	63 - 272	multi-dom	213765

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
261275		Not available	271638	154405	Not available	Not available	AT2G20890.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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