PHATRDRAFT_38886 cell division cycle protein 23-like protein (APC8 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_38886 chr_17 cell division cycle protein 23-like protein (APC8 superfamily) 455684 457731 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0375

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0012
 0.51

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 63.168 4.15E-12 447 - 542 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 63.168 4.15E-12 447 - 542 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 63.168 4.15E-12 447 - 542 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 63.168 4.15E-12 447 - 542 superfamily 238112
APC8 superfamily Anaphase promoting complex subunit 8 / Cdc23; The anaphase-promoting complex is composed of eight... - 83.5012 7.99E-19 30 - 164 superfamily 252336
TPR_11 TPR repeat; TPR repeat. - 37.2931 0.00165187 478 - 539 multi-dom 257739
TPR_11 TPR repeat; TPR repeat. - 37.2931 0.00165187 478 - 539 multi-dom 257739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
35095 Not available 137205 258292 456815 Cre16.g681578.t1.1 AT3G48150.1 566567

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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