PHATRDRAFT_40200 gtp-binding protein (PRK13796)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40200	chr_22	gtp-binding protein (PRK13796)	391864	394177	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0148

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0254	0.23	40000 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YqeH		Circularly permuted YqeH GTPase; YqeH is an essential GTP-binding protein. Depletion of YqeH...	cl17249	187.087	6.66E-55	313 - 526	specific	206748
YlqF_related_GTPase superfamily		Circularly permuted YlqF-related GTPases; These proteins are found in bacteria, eukaryotes, and...	-	187.087	6.66E-55	313 - 526	superfamily	247803
PRK13796		GTPase YqeH; Provisional	-	277.127	7.17E-86	305 - 683	multi-dom	237511

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3583		Not available	172393	236301	194176	Cre07.g315400.t1.1	AT3G57180.1	518854

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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