PHATRDRAFT_42543 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42543	chr_1		372811	373870	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0480

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0189	0.30	6300 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2162 superfamily		Predicted transporter (DUF2162); Members of this family of bacterial proteins are thought to be...	-	35.7397	0.00764133	212 - 278	superfamily	261142
COG3677		Transposase and inactivated derivatives [DNA replication, recombination, and repair]	-	36.617	0.0017246	275 - 324	multi-dom	226202

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268713		Not available	227138	261805	441130	Cre07.g340200.t1.1	AT4G11960.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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