PHATRDRAFT_42673 sec23_ustma protein transport protein sec23 (PLN00162)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42673 chr_1 sec23_ustma protein transport protein sec23 (PLN00162) 753422 755839 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0194
Normalized Mean Residue
Phatr_bicluster_0248
0.29
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec23_C C-terminal Actin depolymerization factor-homology domain of Sec23; The C-terminal domain of the... cl15697 221.093 7.14E-68 608 - 728 specific 200443
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 221.093 7.14E-68 608 - 728 superfamily 265764
vWFA superfamily Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von... - 319.702 6.80E-103 128 - 394 superfamily 260163
Sec23_helical superfamily Sec23/Sec24 helical domain; COPII-coated vesicles carry proteins from the endoplasmic reticulum to... - 119.944 9.31E-32 517 - 617 superfamily 252815
Sec23_helical superfamily Sec23/Sec24 helical domain; COPII-coated vesicles carry proteins from the endoplasmic reticulum to... - 119.944 9.31E-32 517 - 617 superfamily 252815
Sec23_BS superfamily Sec23/Sec24 beta-sandwich domain; Sec23/Sec24 beta-sandwich domain. - 91.8054 5.76E-22 413 - 512 superfamily 254596
Sec23_BS superfamily Sec23/Sec24 beta-sandwich domain; Sec23/Sec24 beta-sandwich domain. - 91.8054 5.76E-22 413 - 512 superfamily 254596
zf-Sec23_Sec24 superfamily Sec23/Sec24 zinc finger; COPII-coated vesicles carry proteins from the endoplasmic reticulum to the... - 80.2976 1.68E-18 61 - 98 superfamily 252812
zf-Sec23_Sec24 superfamily Sec23/Sec24 zinc finger; COPII-coated vesicles carry proteins from the endoplasmic reticulum to the... - 80.2976 1.68E-18 61 - 98 superfamily 252812
PLN00162 transport protein sec23; Provisional - 1316.86 0 5 - 759 multi-dom 215083
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22248 Not available 265625 69678 110979 Cre03.g180850.t1.2 AT2G21630.1 247465
KEGG description KEGG Pathway
Not available Not available
Not available -
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