PHATRDRAFT_42828 rna recognition(or rnp) domain containing protein (RRM_SF superfamily)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42828 chr_1 rna recognition(or rnp) domain containing protein (RRM_SF superfamily) 1255253 1257087 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0424
Normalized Mean Residue
Phatr_bicluster_0006
0.56
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM3_CELF1-6 RNA recognition motif 3 in CELF/Bruno-like family of RNA binding proteins CELF1, CELF2, CELF3,... cl17169 136.227 8.08E-39 402 - 474 specific 240808
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 100.699 6.77E-26 210 - 285 superfamily 266524
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 100.699 6.77E-26 210 - 285 superfamily 266524
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 100.699 6.77E-26 210 - 285 superfamily 266524
ELAV_HUD_SF ELAV/HuD family splicing factor; This model describes the ELAV/HuD subfamily of splicing factors... - 143.542 2.61E-38 125 - 476 multi-dom 233516
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261541 Not available 208519 179721 71934 Cre03.g177200.t1.2 AT4G03110.1 353005
KEGG description KEGG Pathway
Not available Not available
Not available -
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