PHATRDRAFT_43103 (Vps8)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43103 chr_1 (Vps8) 2037327 2042549 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0189

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Vps8 superfamily Golgi CORVET complex core vacuolar protein 8; Vps8 is one of the Golgi complex components necessary... - 213.206 2.99E-62 860 - 1068 superfamily 257320
Vps8 superfamily Golgi CORVET complex core vacuolar protein 8; Vps8 is one of the Golgi complex components necessary... - 213.206 2.99E-62 860 - 1068 superfamily 257320
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 50.4112 1.59E-06 338 - 434 superfamily 238121
Nse5 superfamily DNA repair proteins Nse5 and Nse6; Nse5 and Nse6 are non essential nuclear proteins that are... - 40.2817 0.00416124 1498 - 1595 superfamily 254976

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264276 Not available 178436 247564 Not available Not available AT4G00800.1 494515

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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