PHATRDRAFT_43171 vic family transporter: calcium-activated outward-rectifying potassium ion channel (Ion_trans_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43171 chr_1 vic family transporter: calcium-activated outward-rectifying potassium ion channel (Ion_trans_2) 2224778 2226185 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0084

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0043
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 46.3869 7.14E-07 381 - 439 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 46.3869 7.14E-07 381 - 439 superfamily 238008
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 60.3465 1.50E-11 287 - 345 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 60.3465 1.50E-11 287 - 345 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 60.3465 1.50E-11 287 - 345 superfamily 254488
Ion_trans_2 superfamily Ion channel; This family includes the two membrane helix type ion channels found in bacteria. - 60.3465 1.50E-11 287 - 345 superfamily 254488
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 38.9041 0.000285531 382 - 438 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1684 Not available 141597 Not available Not available Not available AT4G01840.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments