PHATRDRAFT_44200 heat shock transcription factor hsf5 (HSF_DNA-bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44200	chr_3	heat shock transcription factor hsf5 (HSF_DNA-bind)	1291142	1292676	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0307

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0151	0.34	0.000049 610

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HSF_DNA-bind		HSF-type DNA-binding; HSF-type DNA-binding.	cl12113	121.838	1.76E-33	28 - 130	specific	249865
HSF_DNA-bind superfamily		HSF-type DNA-binding; HSF-type DNA-binding.	-	121.838	1.76E-33	28 - 130	superfamily	264552

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269474		Not available	278446	293498	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments