PHATRDRAFT_44346 cop1-interacting protein cip8 (PA superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44346 chr_4 cop1-interacting protein cip8 (PA superfamily) 288740 289951 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0302

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 55.1444 4.95E-10 322 - 367 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 55.1444 4.95E-10 322 - 367 superfamily 266579
PA superfamily PA: Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of... - 63.1166 2.54E-12 227 - 295 superfamily 263543

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6796 Not available 180065 282366 Not available Not available Not available 555187

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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