PHATRDRAFT_44426 peptidylprolyl isomerase-like 4 (RRM_PPIL4)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44426 chr_4 peptidylprolyl isomerase-like 4 (RRM_PPIL4) 511487 513403 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0380

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0137
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_PPIL4 RNA recognition motif in peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) and similar proteins;... cl17169 171.292 7.07E-51 312 - 394 specific 240681
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 171.292 7.07E-51 312 - 394 superfamily 266524
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 127.842 3.49E-34 23 - 224 superfamily 260252
PHA02896 superfamily A-type inclusion like protein; Provisional - 41.5563 0.000622982 433 - 611 superfamily 165222
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 67.2794 1.67E-12 311 - 401 multi-dom 223796

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
16679 Not available 159863 166600 422936 Cre11.g479850.t1.2 AT1G53720.1 264201

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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