PHATRDRAFT_44845 (DENN)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44845 chr_5 (DENN) 419287 423133 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0342

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0245
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DENN DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... cl11519 165.429 4.40E-46 256 - 443 specific 251116
DENN superfamily DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... - 165.429 4.40E-46 256 - 443 superfamily 264408
uDENN Domain always found upstream of DENN domain, found in a variety of signalling proteins; The uDENN... cl04085 74.2932 1.53E-15 153 - 219 specific 214824
uDENN superfamily uDENN domain; This region is always found associated with pfam02141. It is predicted to form an all... - 74.2932 1.53E-15 153 - 219 superfamily 262011
dDENN Domain always found downstream of DENN domain, found in a variety of signalling proteins; The dDENN... cl04084 65.389 1.17E-12 552 - 623 specific 129037
dDENN superfamily dDENN domain; This region is always found associated with pfam02141. It is predicted to form a... - 65.389 1.17E-12 552 - 623 superfamily 262010

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8075 Not available 204005 317290 448142 Cre07.g352900.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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