PHATRDRAFT_44863 polyribonucleotide nucleotidyltransferase (PRK11824)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44863 chr_5 polyribonucleotide nucleotidyltransferase (PRK11824) 470670 473540 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0005

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0200
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNase_PH superfamily RNase PH-like 3'-5' exoribonucleases; RNase PH-like 3'-5'... - 100.67 1.56E-23 52 - 305 superfamily 261591
RNase_PH superfamily RNase PH-like 3'-5' exoribonucleases; RNase PH-like 3'-5'... - 100.67 1.56E-23 52 - 305 superfamily 261591
S1_like superfamily S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated... - 84.9016 1.39E-19 865 - 942 superfamily 263921
KH-I superfamily K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide... - 52.539 1.56E-08 796 - 852 superfamily 266583
PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional - 489.946 3.01E-160 53 - 946 multi-dom 236995

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263495 Not available 194953 252552 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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