PHATRDRAFT_44901 (zf-HC5HC2H)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44901 chr_5 (zf-HC5HC2H) 589855 596111 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0304

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0252
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-HC5HC2H PHD-like zinc-binding domain; The members of this family are annotated as containing PHD domain,... cl17725 67.385 6.64E-13 1015 - 1110 specific 258057
zf-HC5HC2H superfamily PHD-like zinc-binding domain; The members of this family are annotated as containing PHD domain,... - 66.2087 2.12E-12 1250 - 1355 superfamily 266793
zf-HC5HC2H superfamily PHD-like zinc-binding domain; The members of this family are annotated as containing PHD domain,... - 66.2087 2.12E-12 1250 - 1355 superfamily 266793
PHD PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... cl17445 56.3492 1.79E-09 921 - 967 specific 250011
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 56.3492 1.79E-09 921 - 967 superfamily 266687

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23979 Not available 196416 244729 57793 Cre14.g614151.t1.1 AT3G14740.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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