PHATRDRAFT_45159 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45159	chr_6		352800	354851	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0473

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0099	0.44	0.000000012 110000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ARM superfamily		Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence...	-	39.22	0.000547768	482 - 570	superfamily	237987
ARM superfamily		Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence...	-	39.22	0.000547768	482 - 570	superfamily	237987
MTBP_C superfamily		MDM2-binding; MTBP, or MDM2-binding protein, binds to MDM2. The MDM2 protein, through its...	-	41.7776	0.000290522	104 - 189	superfamily	259057

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21525		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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