PHATRDRAFT_46289 amp-activated kinase beta subunit family member (aakb-1) (E_set_AMPKbeta_like_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46289 chr_9 amp-activated kinase beta subunit family member (aakb-1) (E_set_AMPKbeta_like_N) 826496 827512 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0032

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0081
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E_set_AMPKbeta_like_N N-terminal Early set domain, a glycogen binding domain, associated with the catalytic domain of AMP... cl09101 116.159 3.50E-32 116 - 193 specific 199889
E_set superfamily Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or... - 116.159 3.50E-32 116 - 193 superfamily 263719
AMPKBI 5'-AMP-activated protein kinase beta subunit, interation domain; This region is found in... cl08426 97.7024 2.96E-25 255 - 335 specific 252772
AMPKBI superfamily 5'-AMP-activated protein kinase beta subunit, interation domain; This region is found in... - 97.7024 2.96E-25 255 - 335 superfamily 263647

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22399 Not available 213320 164049 357467 Cre10.g457500.t1.1 AT4G16360.1 561976

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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