PHATRDRAFT_47271 polyprenyl synthetase (Trans_IPPS_HT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47271	chr_13	polyprenyl synthetase (Trans_IPPS_HT)	144160	145152	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0051

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0073	0.29	0.0000007 9600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trans_IPPS_HT		Trans-Isoprenyl Diphosphate Synthases, head-to-tail; These trans-Isoprenyl Diphosphate Synthases (...	cl00210	180.44	2.14E-54	20 - 238	specific	173833
Isoprenoid_Biosyn_C1 superfamily		Isoprenoid Biosynthesis enzymes, Class 1; Superfamily of trans-isoprenyl diphosphate synthases (...	-	180.44	2.14E-54	20 - 238	superfamily	260263

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264430		Not available	185189	29177	470946	Not available	Not available	516057

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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