PHATRDRAFT_47930 histidine kinase response regulator hybrid protein (REC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47930 chr_15 histidine kinase response regulator hybrid protein (REC) 459717 462356 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0499

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0116
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 109.202 9.87E-28 585 - 695 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 109.202 9.87E-28 585 - 695 superfamily 267431
HisKA His Kinase A (phospho-acceptor) domain; Dimerization and phospho-acceptor domain of histidine... cl00080 44.0845 1.23E-05 293 - 349 specific 249920
HisKA superfamily Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... - 44.0845 1.23E-05 293 - 349 superfamily 260177
FhlA FOG: GAF domain [Signal transduction mechanisms] cl17456 40.345 0.000569771 115 - 277 specific 225113
GAF superfamily GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... - 40.345 0.000569771 115 - 277 superfamily 266697
PRK15347 two component system sensor kinase SsrA; Provisional - 110.117 6.96E-25 224 - 694 multi-dom 237951

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38647 Not available 242653 250846 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments