PHATRDRAFT_47968 (Chorein_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47968 chr_15 (Chorein_N) 575235 589107 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0219

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0022
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chorein_N superfamily N-terminal region of Chorein, a TM vesicle-mediated sorter; Although mutations in the full-length... - 87.2241 4.49E-19 2 - 119 superfamily 257171
Chorein_N superfamily N-terminal region of Chorein, a TM vesicle-mediated sorter; Although mutations in the full-length... - 87.2241 4.49E-19 2 - 119 superfamily 257171
DUF1162 superfamily Protein of unknown function (DUF1162); This family represents a conserved region within several... - 67.7116 8.59E-12 3456 - 3717 superfamily 253843

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6670 Not available 243119 323294 433404 Cre17.g728250.t1.1 AT5G24740.1 519469

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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