PHATRDRAFT_48084 vacuolar sorting receptor (PA superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48084	chr_16	vacuolar sorting receptor (PA superfamily)	147375	149523	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0435

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0145	0.28	5.4 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PA superfamily		PA: Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of...	-	72.5141	3.15E-15	58 - 185	superfamily	263543

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25062		Not available	171314	184447	Not available	Cre02.g095111.t1.1	AT2G14720.2	506174

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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