PHATRDRAFT_48109 specific transcriptional repressor (JmjC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48109 chr_16 specific transcriptional repressor (JmjC) 228276 231103 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0292

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
JmjC superfamily JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins... - 147.827 2.90E-41 501 - 618 superfamily 202224
JmjC superfamily JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins... - 147.827 2.90E-41 501 - 618 superfamily 202224
MBT superfamily mbt repeat; The function of this repeat is unknown, but is found in a number of nuclear proteins... - 40.3106 0.000247362 779 - 823 superfamily 266779

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22122 Not available 237169 32023 Not available Cre02.g078700.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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