PHATRDRAFT_4896 gtp-binding protein (COG0218)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4896	chr_12	gtp-binding protein (COG0218)	710930	711583	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0058

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0146	0.20	400 990

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YihA_EngB		YihA (EngB) GTPase family; The YihA (EngB) subfamily of GTPases is typified by the E. coli YihA, an...	cl17170	190.414	2.99E-61	23 - 197	specific	206665
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	190.414	2.99E-61	23 - 197	superfamily	266525
COG0218		Predicted GTPase [General function prediction only]	-	204.773	2.11E-66	4 - 197	multi-dom	223296

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35207		Not available	Not available	302272	433263	Cre12.g524950.t1.1	AT2G22870.1	383431

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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