PHATRDRAFT_50292 (GLECT superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50292 chr_28 (GLECT superfamily) 203148 204800 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0275

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0009
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_SF RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... cl17169 43.8329 7.59E-06 449 - 511 specific 240668
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 43.8329 7.59E-06 449 - 511 superfamily 266524
GLECT superfamily Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose... - 59.2218 1.17E-10 288 - 388 superfamily 260171

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8768 Not available 248833 318621 Not available Not available Not available 350265

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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