PHATRDRAFT_50315 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50315	chr_28		271357	273750	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0342

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0202	0.37	0.0005 6000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HATPase_c		Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally...	cl00075	43.4618	2.00E-05	39 - 174	specific	251347
HATPase_c superfamily		Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:...	-	43.4618	2.00E-05	39 - 174	superfamily	260175

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
870		Not available	258497	63970	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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