PHATRDRAFT_50440 4snc-tudor domain protein (SNc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50440 chr_30 4snc-tudor domain protein (SNc) 67018 70101 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0129

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0077
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TUDOR Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein... cl02573 53.3707 6.95E-09 773 - 823 specific 119391
TUDOR superfamily Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein... - 53.3707 6.95E-09 773 - 823 superfamily 261354
SNc superfamily Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes... - 38.4094 0.0014038 855 - 954 superfamily 238102
SNc superfamily Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes... - 38.4094 0.0014038 855 - 954 superfamily 238102
SNc superfamily Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes... - 38.4094 0.0014038 855 - 954 superfamily 238102
SNc superfamily Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes... - 38.4094 0.0014038 855 - 954 superfamily 238102
SNc superfamily Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes... - 38.4094 0.0014038 855 - 954 superfamily 238102
SNc Staphylococcal nuclease homologues; Staphylococcal nuclease homologues. - 64.9753 3.28E-12 25 - 196 multi-dom 214615
SNc Staphylococcal nuclease homologues; Staphylococcal nuclease homologues. - 64.9753 3.28E-12 25 - 196 multi-dom 214615
TUDOR Tudor domain; Tudor domain. - 65.4815 1.72E-12 728 - 843 multi-dom 249965

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20637 Not available 225570 211191 452958 Cre11.g477850.t1.1 AT5G07350.1 349305

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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