PHATRDRAFT_51120 leucyl-trna synthetase (leuS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51120 chr_16 leucyl-trna synthetase (leuS) 355306 357675 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0134

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0169
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LeuRS_core catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic core... cl00015 334.601 8.91E-108 1 - 591 specific 173906
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 334.601 8.91E-108 1 - 591 superfamily 260139
Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; This... cl12020 136.966 1.19E-37 591 - 693 specific 153412
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 136.966 1.19E-37 591 - 693 superfamily 264512
tRNA-synt_1_2 superfamily Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ligase... - 278.209 3.13E-88 182 - 366 superfamily 257918
tRNA-synt_1_2 superfamily Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ligase... - 278.209 3.13E-88 182 - 366 superfamily 257918
leuS leucyl-tRNA synthetase; Validated - 1287.73 0 1 - 777 multi-dom 234743

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261684 Not available 254958 296884 420918 Cre13.g578451.t1.1 AT4G04350.1 314467

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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