PHATRDRAFT_51407 polgamma1 (polymerase gamma 1) dna binding dna-directed dna polymerase (DNA_pol_A_plastid_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51407 chr_1 polgamma1 (polymerase gamma 1) dna binding dna-directed dna polymerase (DNA_pol_A_plastid_like) 1345811 1348619 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0253

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0119
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DNA_pol_A_plastid_like DNA polymerase A type from plastids of higher plants possibly involve in DNA replication or in the... cl02626 540.061 0 435 - 772 specific 176477
DNA_pol_A superfamily Family A polymerase primarily fills DNA gaps that arise during DNA repair, recombination and... - 540.061 0 435 - 772 superfamily 261379
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 115.31 4.26E-29 26 - 247 superfamily 263941
PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication,... - 267.977 2.23E-79 2 - 774 multi-dom 223820

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
270013 Not available 199589 249814 208668 Cre08.g363837.t1.1 AT1G50840.1 284102

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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