PHATRDRAFT_54486 (NOX_Duox_like_FAD_NADP)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54486 chr_8 (NOX_Duox_like_FAD_NADP) 487643 492214 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0231

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0017
 0.46

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide... cl06868 108.931 3.65E-26 888 - 1040 specific 99783
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 108.931 3.65E-26 888 - 1040 superfamily 263080
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 45.5144 6.05E-06 273 - 323 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 45.5144 6.05E-06 273 - 323 superfamily 266579
Ferric_reduct Ferric reductase like transmembrane component; This family includes a common region in the... cl01043 77.3356 2.91E-16 662 - 809 specific 250871
Ferric_reduct superfamily Ferric reductase like transmembrane component; This family includes a common region in the... - 77.3356 2.91E-16 662 - 809 superfamily 260761

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11375 Not available 235878 206009 Not available Cre05.g241400.t1.1 AT5G49740.1 474806

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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