PHATRDRAFT_54511 beta-cop-like protein (COG5096)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54511 chr_9 beta-cop-like protein (COG5096) 84527 87963 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0255

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Coatomer_b_Cpla superfamily Coatomer beta subunit appendage platform; This family is found at the C-terminus of the coatamer... - 239.464 8.72E-74 836 - 965 superfamily 258943
Coatomer_b_Cpla superfamily Coatomer beta subunit appendage platform; This family is found at the C-terminus of the coatamer... - 239.464 8.72E-74 836 - 965 superfamily 258943
Coatamer_beta_C superfamily Coatomer beta C-terminal region; This family is found at the C-terminus of the coatamer beta... - 235.187 4.57E-72 692 - 832 superfamily 254382
Coatamer_beta_C superfamily Coatomer beta C-terminal region; This family is found at the C-terminus of the coatamer beta... - 235.187 4.57E-72 692 - 832 superfamily 254382
COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] - 300.106 4.90E-88 18 - 941 multi-dom 227427

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
26212 Not available 169344 254613 464820 Cre04.g217921.t1.1 AT4G31490.1 263776

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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