PHATRDRAFT_605 mitochondrial helicase twinkle (RecA-like_NTPases superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_605 chr_18 mitochondrial helicase twinkle (RecA-like_NTPases superfamily) 156423 158812 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0218
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TOPRIM_primases TOPRIM_primases: The topoisomerase-primase (TORPIM) nucleotidyl transferase/hydrolase domain found... cl00718 66.9102 1.36E-13 265 - 341 specific 173779
TOPRIM superfamily Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA,... - 66.9102 1.36E-13 265 - 341 superfamily 260587
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 227.28 7.46E-69 409 - 644 superfamily 266574
DnaB_C DnaB-like helicase C terminal domain; The hexameric helicase DnaB unwinds the DNA duplex at the... - 42.5513 0.000168572 403 - 646 multi-dom 252168

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
35968 Not available 181837 205983 Not available Not available AT1G30680.1 479432

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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