PHATRDRAFT_9606 (Haemolytic)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_9606	chr_1	(Haemolytic)	1520002	1520244	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0118

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0079	0.32	0.00097 5000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Haemolytic		Haemolytic domain; This domain has haemolytic activity. It is found in short (73-103 amino acid)...	cl00506	103.668	1.91E-30	1 - 68	specific	250883
Haemolytic superfamily		Haemolytic domain; This domain has haemolytic activity. It is found in short (73-103 amino acid)...	-	103.668	1.91E-30	1 - 68	superfamily	260467

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31562		Not available	179761	296040	60672	Cre17.g720183.t1.1	AT3G09310.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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