1083 MATE_eukaryotic
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1083 chr_1 MATE_eukaryotic 618788 620578 - MATE_eukaryotic

Synonyms

NCBI ID Ensembl Genomes exon ID
7449757 Thaps1083.2, Thaps1083.3, Thaps1083.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0266

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0024
 0.39

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.8871

264556

FBPase
0.8686

262396

Fe_bilin_red superfamily
0.8642

5414

hypothetical protein
0.863

263721

LMF1
0.8588

261040

RsuA
0.8562

12899

AAA
0.8477

bd168

(bd168) Peptidase_S9 superfamily
0.8422

24525

hypothetical protein
0.8411

20589

hypothetical protein
0.8395

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_eukaryotic Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family; The integral... cl09326 368.053 4.49E-122 41 - 477 specific 240537
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 368.053 4.49E-122 41 - 477 superfamily 263758
NorM Na+-driven multidrug efflux pump [Defense mechanisms] - 257.923 1.79E-79 33 - 481 multi-dom 223608

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48159 PHATRDRAFT_48159 Not available Not available 213895 Cre14.g610750.t1.1 AT1G71140.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006855 GO:0015238 GO:0015297 GO:0016020 -

GO:0006855

drug transmembrane transport

Details: 
The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015238

drug transmembrane transporter activity

Details: 
Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO Category: 
MF

GO:0015297

antiporter activity

Details: 
Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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