1382 GAT_1 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1382	chr_1	GAT_1 superfamily	1369964	1371043	+	GAT_1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451460	Thaps1382.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0142

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0152	0.38	0.14 0.024

Most Highly Correlated Transcripts

bd410 (bd410) HNHc 0.9072	2773 hypothetical protein 0.9035	bd415 (bd415) arom_aa_hydroxylase superfamily 0.9001	12021 hypothetical protein 0.8959	34042 Abhydrolase_6 0.8916	8445 hypothetical protein 0.8916
2516 hypothetical protein 0.8848	39767 TLP_HIUase 0.8846	23830 (GCD1) GCD 0.8842	8718 hypothetical protein 0.8807

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GAT_1 superfamily		Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1...	-	80.7523	2.98E-18	90 - 253	superfamily	260141

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_34923	PHATRDRAFT_34923	177783	297915	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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