14140 PDI_a_family
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14140 chr_2 PDI_a_family 2133831 2135780 + PDI_a_family

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0199

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0098
 0.36

Most Highly Correlated Transcripts

12836

EEP superfamily
0.8874

26239

(RPN1) RPN1
0.867

12899

AAA
0.8646

33725

(RPN11) MPN_RPN11_CSN5
0.8638

264556

FBPase
0.8633

bd463

(bd463) Aa_trans superfamily
0.8625

13448

Sec1
0.8611

260861

AAA
0.8582

2145

hypothetical protein
0.847

16114

PLN02350
0.8467

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic... cl00388 112.704 4.13E-30 146 - 251 specific 239259
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 112.704 4.13E-30 146 - 251 superfamily 260398
COPIIcoated_ERV superfamily Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans... - 102.763 3.03E-25 281 - 456 superfamily 254553
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 87.1618 7.98E-21 7 - 94 superfamily 258122
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 87.1618 7.98E-21 7 - 94 superfamily 258122

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43106 PHATRDRAFT_43106 196306 319666 Not available Not available AT4G27080.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0003756 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0003756

protein disulfide isomerase activity

Details: 
Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.
GO Category: 
MF

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